String data structures | Substring indices

Suffix array

In computer science, a suffix array is a sorted array of all suffixes of a string. It is a data structure used in, among others, full-text indices, data-compression algorithms, and the field of bibliometrics. Suffix arrays were introduced by as a simple, space efficient alternative to suffix trees. They had independently been discovered by Gaston Gonnet in 1987 under the name PAT array. gave the first in-place time suffix array construction algorithm that is optimal both in time and space, where in-place means that the algorithm only needs additional space beyond the input string and the output suffix array. Enhanced suffix arrays (ESAs) are suffix arrays with additional tables that reproduce the full functionality of suffix trees preserving the same time and memory complexity.The suffix array for a subset of all suffixes of a string is called . Multiple probabilistic algorithms have been developed to minimize the additional memory usage including an optimal time and memory algorithm. (Wikipedia).

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Big O notation | Time complexity | Compressed suffix array | Suffix tree | Burrows–Wheeler transform | Suffix (computer science) | Source lines of code | External memory algorithm | LCP array | Comparison sort | FM-index | Ukkonen's algorithm | String (computer science)