Markov models

GLIMMER

In bioinformatics, GLIMMER (Gene Locator and Interpolated Markov ModelER) is used to find genes in prokaryotic DNA. "It is effective at finding genes in bacteria, archea, viruses, typically finding 98-99% of all relatively long protein coding genes". GLIMMER was the first system that used the interpolated Markov model to identify coding regions. The GLIMMER software is open source and is maintained by Steven Salzberg, Art Delcher, and their colleagues at the Center for Computational Biology at Johns Hopkins University. The original GLIMMER algorithms and software were designed by Art Delcher, Simon Kasif and Steven Salzberg and applied to bacterial genome annotation in collaboration with Owen White. (Wikipedia).

GLIMMER
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From playlist Music Lessons

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From playlist Optics

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From playlist Ruby Conference 2008

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From playlist EmberConf 2018

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From playlist Dinosaurjs 2018

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EmberConf 2021 - Keynote Part 1 by Yehuda Katz

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From playlist EmberConf 2021

Related pages

Gibbs sampling | DNA | Minimum description length | Markov model | Amino acid | K-mer | Gene prediction